Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane lipoprotein, ompa family | ALO42_02134 | Not Available | Positive | 427280 - 428062 | 28425.6 |
| putative lipoprotein | ALO42_02135 | Not Available | Negative | 428142 - 428462 | 11499.0 |
| alpha/beta superfamily hydrolase | ALO42_02136 | Not Available | Negative | 428459 - 429355 | 32896.7 |
| hypothetical protein | ALO42_102155 | Not Available | Positive | 429356 - 429577 | 8551.2 |
| uncharacterized protein | ALO42_02137 | Not Available | Negative | 429559 - 430836 | 47826.4 |
| transcriptional regulator, tetr family | ALO42_100200 | Not Available | Negative | 430971 - 431744 | 29239.4 |
| lysine--trna ligase | ALO42_04857 | Not Available | Negative | 431788 - 433290 | 57080.1 |
| peptide chain release factor 2 | ALO42_02139 | Not Available | Negative | 433360 - 434241 | 32698.3 |
| hypothetical protein | ALO42_102460 | Not Available | Positive | 434296 - 434427 | 4925.02 |
| two-component system response regulator wspr | ALO42_02140 | Not Available | Negative | 434573 - 435577 | 37112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









