Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_02665 | Not Available | Negative | 396060 - 396491 | 16478.9 |
| allergen v5/tpx-1 related protein | ALO42_101712 | Not Available | Negative | 396665 - 397261 | 21253.0 |
| uncharacterized protein | ALO42_02666 | Not Available | Negative | 397642 - 397884 | 8944.44 |
| amino acid permease | ALO42_02667 | Not Available | Positive | 398085 - 399404 | 45696.2 |
| l-arabinose abc transporter permease | ALO42_02668 | Not Available | Negative | 399535 - 400524 | 34937.0 |
| arabinose import atp-binding protein arag | ALO42_02669 | Not Available | Negative | 400541 - 402064 | 55487.6 |
| l-arabinose-binding periplasmic protein araf | ALO42_02670 | Not Available | Negative | 402120 - 403145 | 36642.1 |
| senescence marker protein-30 | ALO42_02671 | Not Available | Negative | 403339 - 404211 | 31548.2 |
| aldose 1-epimerase | ALO42_02672 | Not Available | Positive | 404491 - 405639 | 41463.9 |
| metal ion abc-type transport system, periplasmic substrate-binding protein | ALO42_02673 | Not Available | Negative | 405690 - 406586 | 32199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









