Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase-like domain protein | ALO42_02655 | Not Available | Negative | 382415 - 382999 | 21705.7 |
| xanthine and co dehydrogenase maturation factor, xdhc/coxf family | ALO42_02656 | Not Available | Negative | 383744 - 384712 | 33783.0 |
| aldehyde oxidase and xanthine dehydrogenase | ALO42_02657 | Not Available | Negative | 384715 - 386931 | 79648.6 |
| xanthine dehydrogenase, fad-binding subunit | ALO42_02658 | Not Available | Negative | 386941 - 387924 | 35085.1 |
| xanthine dehydrogenase, iron-sulfur subunit | ALO42_02659 | Not Available | Negative | 387924 - 388613 | 23979.7 |
| putative malate:quinone oxidoreductase | ALO42_02660 | Not Available | Positive | 389495 - 391147 | 60253.9 |
| uncharacterized protein | ALO42_04962 | Not Available | Positive | 391160 - 391540 | 13951.3 |
| phytochrome:gaf:atp-binding region | ALO42_02662 | Not Available | Positive | 391915 - 394926 | 110231.0 |
| two component response regulator reciever-domain protein | ALO42_02663 | Not Available | Positive | 394923 - 395300 | 13696.4 |
| uncharacterized protein | ALO42_02664 | Not Available | Negative | 395323 - 396060 | 27154.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









