Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase | ALO42_02637 | Not Available | Positive | 358876 - 359811 | 34102.8 |
| succinate-semialdehyde dehydrogenase | ALO42_02638 | Not Available | Negative | 359882 - 361312 | 50781.0 |
| rhs family protein | ALO42_02639 | Not Available | Positive | 361558 - 364335 | 102600.0 |
| short chain dehydrogenase/reductase oxidoreductase | ALO42_02640 | Not Available | Negative | 364443 - 365303 | 30699.6 |
| aldehyde-dismutating formaldehyde dehydrogenase | ALO42_02641 | Not Available | Negative | 365416 - 366555 | 40566.2 |
| putative amino acid synthesis-associated protein | ALO42_02642 | Not Available | Positive | 366826 - 367416 | 21499.9 |
| 3-oxoadipate enol-lactone hydrolase family protein | ALO42_02643 | Not Available | Positive | 367470 - 368318 | 30217.2 |
| aldehyde dehydrogenase family protein | ALO42_02644 | Not Available | Positive | 368315 - 369796 | 53003.3 |
| flavin reductase domain protein | ALO42_02645 | Not Available | Positive | 369810 - 370295 | 17445.0 |
| gntr family transcriptional regulator | ALO42_04959 | Not Available | Positive | 370255 - 371223 | 35851.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









