Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-tail connector ii | ALO42_02783 | Not Available | Negative | 2826106 - 2826405 | 11317.8 |
| Major head subunit | ALO42_101130 | Not Available | Negative | 2826669 - 2827874 | 44654.6 |
| Putative prohead protease | ALO42_02784 | Not Available | Negative | 2827871 - 2828512 | 23424.0 |
| Portal protein | ALO42_02785 | Not Available | Negative | 2828499 - 2829713 | 45158.1 |
| Gp79 | ALO42_02786 | Not Available | Negative | 2829716 - 2831404 | 61571.1 |
| Gp80 | ALO42_02787 | Not Available | Negative | 2831401 - 2831874 | 16215.4 |
| P58 | ALO42_100963 | Not Available | Negative | 2832014 - 2832352 | 12533.9 |
| uncharacterized protein | ALO42_02788 | Not Available | Negative | 2832356 - 2832640 | 10391.2 |
| Holin | ALO42_02789 | Not Available | Negative | 2833026 - 2833397 | 13359.8 |
| Putative antitermination protein q | ALO42_02790 | Not Available | Negative | 2834753 - 2835100 | 12948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









