Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase | ALO42_03411 | Not Available | Positive | 4140928 - 4141491 | 20244.4 |
| putative multidrug abc-type transport system, atpase/permease fusion protein | ALO42_03412 | Not Available | Positive | 4141593 - 4143425 | 67673.2 |
| acyltransferase superfamily protein | ALO42_03413 | Not Available | Negative | 4144069 - 4145196 | 42633.4 |
| leucine-rich repeat domain protein | ALO42_05162 | Not Available | Negative | 4145236 - 4150206 | 186455.0 |
| 3-oxoacyl- synthase iii | ALO42_03415 | Not Available | Negative | 4150252 - 4151373 | 40385.9 |
| atp-dependent helicase hrpa | ALO42_05164 | Not Available | Negative | 4151615 - 4155580 | 149629.0 |
| prevent-host-death protein | ALO42_03417 | Not Available | Positive | 4155700 - 4155945 | 8841.77 |
| long-chain-fatty-acid--coa ligase | ALO42_03418 | Not Available | Negative | 4156218 - 4157909 | 62004.7 |
| long-chain-fatty-acid--coa ligase | ALO42_03419 | Not Available | Negative | 4158264 - 4159976 | 62540.3 |
| hypothetical protein | ALO42_101897 | Not Available | Positive | 4159947 - 4160138 | 7137.53 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









