Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily | ALO42_03402 | Not Available | Positive | 4129484 - 4129867 | 12895.0 |
| uncharacterized protein | ALO42_03403 | Not Available | Positive | 4130341 - 4130778 | 15673.9 |
| uncharacterized protein | ALO42_03404 | Not Available | Negative | 4130835 - 4131410 | 21197.1 |
| uncharacterized protein | ALO42_03405 | Not Available | Positive | 4131865 - 4132410 | 21190.7 |
| short-chain acid dehydrogenase family oxidoreductase | ALO42_03406 | Not Available | Positive | 4132489 - 4133223 | 25925.0 |
| uncharacterized protein | ALO42_03407 | Not Available | Negative | 4133225 - 4134103 | 32526.6 |
| hypothetical protein | ALO42_101060 | Not Available | Negative | 4134146 - 4134325 | 6550.68 |
| mannuronan epimerase | ALO42_05161 | Not Available | Positive | 4134335 - 4139203 | 167874.0 |
| uncharacterized protein | ALO42_03409 | Not Available | Negative | 4139390 - 4139704 | 11598.1 |
| lysr family transcriptional regulator | ALO42_03410 | Not Available | Positive | 4139772 - 4140695 | 33913.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









