Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative s1-domain rna-bindining protein | ALO42_03385 | Not Available | Negative | 4107250 - 4108086 | 31066.4 |
| uncharacterized protein | ALO42_03386 | Not Available | Positive | 4108393 - 4108581 | 6409.79 |
| uncharacterized protein | ALO42_03387 | Not Available | Positive | 4108749 - 4109261 | 18854.5 |
| uncharacterized protein | ALO42_03388 | Not Available | Positive | 4109406 - 4110134 | 26341.9 |
| putative lipoprotein | ALO42_03389 | Not Available | Positive | 4110204 - 4111067 | 33479.0 |
| uncharacterized protein | ALO42_03390 | Not Available | Negative | 4111174 - 4111476 | 11145.0 |
| atp-dependent rna helicase srmb | ALO42_03391 | Not Available | Negative | 4111661 - 4113022 | 49581.5 |
| regulatory protein, lysr:lysr, substrate-binding protein | ALO42_05158 | Not Available | Negative | 4113314 - 4114303 | 36389.3 |
| hypothetical protein | ALO42_03393 | Not Available | Positive | 4114302 - 4115084 | 29074.4 |
| putative alpha/beta superfamily hydrolase | ALO42_03394 | Not Available | Negative | 4115145 - 4116110 | 35264.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









