Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | ALO42_03361 | Not Available | Negative | 4079444 - 4079755 | 11474.2 |
| glycine betaine/l-proline abc-type transport system, periplasmic substrate-binding protein | ALO42_03362 | Not Available | Negative | 4079990 - 4080844 | 30871.4 |
| hypothetical protein | ALO42_102231 | Not Available | Positive | 4080885 - 4081175 | 10305.3 |
| putative lipoprotein | ALO42_03363 | Not Available | Positive | 4082024 - 4083322 | 48459.9 |
| vacj family outer membrane lipoprotein | ALO42_03364 | Not Available | Positive | 4083315 - 4084127 | 30423.0 |
| uncharacterized protein | ALO42_03365 | Not Available | Positive | 4084261 - 4084851 | 20108.5 |
| major facilitator superfamily transporter | ALO42_03366 | Not Available | Positive | 4085055 - 4086257 | 41254.7 |
| diguanylate cye | ALO42_03367 | Not Available | Positive | 4086556 - 4087632 | 39814.5 |
| uncharacterized protein | ALO42_03368 | Not Available | Negative | 4087637 - 4088506 | 32191.9 |
| hypothetical protein | ALO42_101165 | Not Available | Negative | 4088561 - 4088995 | 15632.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









