Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_00378 | Not Available | Negative | 3997444 - 3997716 | 10328.8 |
| c-5 cytosine-specific dna methylase family protein | ALO42_00379 | Not Available | Negative | 3998332 - 3999480 | 40197.9 |
| c-5 cytosine-specific dna methylase | ALO42_00380 | Not Available | Negative | 3999631 - 4000059 | 15808.3 |
| non-ribosomal peptide synthetase | ALO42_00648 | Not Available | Positive | 4000134 - 4001160 | 37862.4 |
| uvrabc system protein c | ALO42_00763 | Not Available | Positive | 4001182 - 4002198 | 37089.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ALO42_00764 | Not Available | Positive | 4002225 - 4002791 | 20799.2 |
| Trna-gly | Not Available | Not Available | Positive | 4002858 - 4002933 | Not Available |
| uncharacterized protein | ALO42_00765 | Not Available | Negative | 4003026 - 4003484 | 17499.9 |
| lipoprotein | ALO42_00766 | Not Available | Positive | 4003983 - 4004651 | 24391.1 |
| outer membrane ligand receptor | ALO42_00767 | Not Available | Positive | 4005223 - 4007670 | 87851.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









