Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic binding protein/laci transcriptional regulator | ALO42_00370 | Not Available | Positive | 3985059 - 3986063 | 35837.0 |
| abc transporter | ALO42_00371 | Not Available | Positive | 3986079 - 3987650 | 56495.0 |
| inner-membrane translocator | ALO42_00372 | Not Available | Positive | 3987637 - 3988641 | 34322.4 |
| inner-membrane translocator | ALO42_00373 | Not Available | Positive | 3988638 - 3989624 | 33720.4 |
| acyl-coa dehydrogenase family protein | ALO42_00374 | Not Available | Negative | 3989632 - 3990870 | 44631.4 |
| acyl-coa dehydrogenase | ALO42_100046 | Not Available | Positive | 3991120 - 3992511 | 49971.2 |
| uncharacterized protein | ALO42_00375 | Not Available | Positive | 3992527 - 3992967 | 16072.0 |
| nitrilotriacetate monooxygenase family fmn-dependent oxidoreductase | ALO42_00376 | Not Available | Positive | 3992972 - 3994372 | 52331.9 |
| tannase/feruloyl esterase family protein | ALO42_00377 | Not Available | Positive | 3994811 - 3996550 | 62407.1 |
| Trna-cys | Not Available | Not Available | Positive | 3996751 - 3996824 | Not Available |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









