Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine/ornithine abc-type transport system, periplasmic substrate-binding protein aotj | ALO42_00951 | Not Available | Negative | 3974110 - 3974901 | 28599.5 |
| acetyl-coenzyme a synthetase | ALO42_04518 | Not Available | Negative | 3975418 - 3977442 | 73873.9 |
| uncharacterized protein | ALO42_00953 | Not Available | Positive | 3977768 - 3978034 | 9409.39 |
| aromatic amino acid metabolism regulator phhr | ALO42_00954 | Not Available | Negative | 3978132 - 3979709 | 57595.9 |
| phenylalanine-4-hydroxylase | ALO42_00955 | Not Available | Positive | 3979976 - 3980773 | 29980.2 |
| putative pterin-4-alpha-carbinolamine dehydratase | ALO42_00956 | Not Available | Positive | 3980809 - 3981165 | 13298.8 |
| uncharacterized protein | ALO42_00957 | Not Available | Positive | 3981566 - 3981799 | 8389.13 |
| putative transporter | ALO42_100503 | Not Available | Positive | 3981924 - 3983138 | 42155.6 |
| hypothetical protein | ALO42_04521 | Not Available | Negative | 3983375 - 3983509 | 4922.11 |
| hypothetical protein | ALO42_102694 | Not Available | Negative | 3984209 - 3985084 | 30892.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









