Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-succinylglutamate 5-semialdehyde dehydrogenase | ALO42_00942 | Not Available | Negative | 3964438 - 3965904 | 51376.3 |
| arginine n-succinyltransferase, beta subunit | ALO42_00943 | Not Available | Negative | 3965904 - 3966929 | 37464.9 |
| arginine n-succinyltransferase, alpha subunit | ALO42_04516 | Not Available | Negative | 3966993 - 3968081 | 39250.8 |
| bifunctional n-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein | ALO42_04517 | Not Available | Negative | 3968158 - 3969441 | 45887.8 |
| hypothetical protein | ALO42_100618 | Not Available | Positive | 3969361 - 3969546 | 6784.36 |
| arginine utilization pathway regulatory protein argr | ALO42_00946 | Not Available | Negative | 3969612 - 3970667 | 39000.9 |
| arginine/ornithine abc-type transport system, atp-binding protein | ALO42_00947 | Not Available | Negative | 3970740 - 3971519 | 28577.8 |
| uncharacterized protein | ALO42_00948 | Not Available | Negative | 3971527 - 3972639 | 40271.1 |
| arginine/ornithine abc-type transport system, permease protein aotm | ALO42_00949 | Not Available | Negative | 3972641 - 3973339 | 25983.4 |
| arginine/ornithine abc-type transport system, permease protein aotq | ALO42_00950 | Not Available | Negative | 3973336 - 3974025 | 24895.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









