Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3954785 - 3954861 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 3954971 - 3955061 | Not Available |
| carbon storage regulator -like protein | ALO42_00935 | Not Available | Negative | 3955124 - 3955312 | 6953.53 |
| aspartokinase | ALO42_00936 | Not Available | Negative | 3955482 - 3956714 | 44431.4 |
| alanine--trna ligase | ALO42_04512 | Not Available | Negative | 3956806 - 3959532 | 98189.5 |
| threonine aldolase, low-specificity | ALO42_101737 | Not Available | Negative | 3959575 - 3960933 | 49229.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALO42_00938 | Not Available | Positive | 3961084 - 3961596 | 18792.3 |
| succinylglutamate desuccinylase | ALO42_04514 | Not Available | Negative | 3961675 - 3962706 | 38210.0 |
| uncharacterized protein | ALO42_00940 | Not Available | Negative | 3962694 - 3962981 | 10515.3 |
| n-succinylarginine dihydrolase | ALO42_04515 | Not Available | Negative | 3963043 - 3964407 | 49528.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









