Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laba-like protein | ALO42_00921 | Not Available | Positive | 3936405 - 3937199 | 28836.3 |
| uncharacterized protein | ALO42_04507 | Not Available | Negative | 3937169 - 3937588 | 15422.5 |
| hydrolase | ALO42_00922 | Not Available | Negative | 3937806 - 3938669 | 31811.3 |
| tetr family transcriptional regulator | ALO42_00923 | Not Available | Positive | 3938787 - 3939389 | 21901.3 |
| short-chain dehydrogenase/reductase sdr | ALO42_00924 | Not Available | Positive | 3939644 - 3940432 | 27993.5 |
| alcohol dehydrogenase and quinone reductase-like medium chain degydrogenase/reductase | ALO42_00925 | Not Available | Positive | 3940453 - 3941493 | 36896.2 |
| short chain dehydrogenase | ALO42_00926 | Not Available | Positive | 3941547 - 3942371 | 29575.4 |
| regulatory protein, tetr | ALO42_00927 | Not Available | Negative | 3942411 - 3942995 | 21323.5 |
| hypothetical protein | ALO42_100310 | Not Available | Negative | 3943194 - 3943895 | 26533.4 |
| small-conductance mechanosensitive channel family protein | ALO42_00928 | Not Available | Positive | 3944235 - 3946643 | 86219.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









