Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 3-hydroxyisobutyrate dehydrogenase | ALO42_00912 | Not Available | Negative | 3925413 - 3926303 | 30262.5 |
| transcriptional regulator, lysr family | ALO42_00913 | Not Available | Positive | 3926435 - 3927370 | 34564.2 |
| glutathione-dependent formaldehyde dehydrogenase | ALO42_00914 | Not Available | Positive | 3927476 - 3928711 | 43619.6 |
| asp/glu racemase | ALO42_04506 | Not Available | Negative | 3929122 - 3929922 | 28423.4 |
| transcriptional regulator gntr | ALO42_00916 | Not Available | Negative | 3929864 - 3930583 | 26468.7 |
| hypothetical protein | ALO42_101091 | Not Available | Negative | 3930797 - 3930976 | 6784.53 |
| nucleobase-cation-symport-1 transporter subfamily protein | ALO42_00917 | Not Available | Positive | 3930929 - 3932380 | 53035.9 |
| uncharacterized protein | ALO42_00918 | Not Available | Positive | 3932667 - 3934745 | 75134.5 |
| uncharacterized protein | ALO42_00919 | Not Available | Positive | 3934747 - 3935109 | 13475.7 |
| arac family transcriptional regulator | ALO42_00920 | Not Available | Negative | 3935143 - 3936156 | 37669.4 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









