Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALO42_05137 | Not Available | Positive | 3914722 - 3915521 | 28617.8 |
| uncharacterized protein | ALO42_00903 | Not Available | Positive | 3915588 - 3916208 | 22880.8 |
| uncharacterized protein | ALO42_00904 | Not Available | Positive | 3916224 - 3917597 | 47888.9 |
| lysr family transcriptional activator | ALO42_00905 | Not Available | Negative | 3917623 - 3918534 | 33975.0 |
| l-serine dehydratase 1 | ALO42_00906 | Not Available | Positive | 3918661 - 3920040 | 49444.5 |
| homoserine/lysine/threonine efflux protein, lyse/ygga family | ALO42_00907 | Not Available | Negative | 3920071 - 3920706 | 22880.0 |
| yqci/ycgg family protein | ALO42_00908 | Not Available | Negative | 3920713 - 3921495 | 29911.5 |
| lysr family transcriptional regulator | ALO42_00909 | Not Available | Positive | 3921647 - 3922591 | 35206.0 |
| peptidase m20d, amidohydrolase | ALO42_04505 | Not Available | Negative | 3922730 - 3923917 | 42551.1 |
| aldehyde dehydrogenase | ALO42_00911 | Not Available | Negative | 3923892 - 3925409 | 54247.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









