Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain protein | ALO42_03565 | Not Available | Positive | 3854261 - 3854560 | 11001.0 |
| vacj-like lipoprotein | ALO42_03566 | Not Available | Negative | 3854650 - 3855351 | 25660.6 |
| phosphatase/phosphohexomutase-like protein | ALO42_05229 | Not Available | Positive | 3855433 - 3856158 | 26241.9 |
| uncharacterized protein | ALO42_03568 | Not Available | Positive | 3856262 - 3856531 | 10139.9 |
| nadph dependent preq0 reductase | ALO42_100000 | Not Available | Negative | 3856684 - 3857598 | 33850.3 |
| lipoprotein releasing system, transmembrane protein lole | ALO42_03569 | Not Available | Negative | 3857645 - 3858889 | 44577.4 |
| lipoprotein-releasing system atp-binding protein lold | ALO42_03570 | Not Available | Negative | 3858965 - 3859663 | 25158.4 |
| uncharacterized protein | ALO42_03571 | Not Available | Negative | 3859656 - 3860906 | 45517.3 |
| pilz domain protein | ALO42_03572 | Not Available | Positive | 3861009 - 3861596 | 21696.8 |
| glycerophosphoryl diester phosphodiesterase | ALO42_03573 | Not Available | Positive | 3861641 - 3862363 | 26862.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









