Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box histidine kinase/response regulator | ALO42_100270 | Not Available | Positive | 3831390 - 3833747 | 87399.3 |
| two-component system response regulator | ALO42_03553 | Not Available | Positive | 3833744 - 3834208 | 17730.6 |
| universal stress family protein | ALO42_03554 | Not Available | Negative | 3834209 - 3834640 | 15029.4 |
| pp_03293 | ALO42_03555 | Not Available | Negative | 3834752 - 3835771 | Not Available |
| regulatory protein, lysr:lysr, substrate-binding | ALO42_05226 | Not Available | Negative | 3836012 - 3836968 | 35030.8 |
| uncharacterized protein | ALO42_03557 | Not Available | Negative | 3837219 - 3837671 | 16349.4 |
| diaminobutyrate-pyruvate aminotransferase | ALO42_100614 | Not Available | Negative | 3838383 - 3839663 | 46351.6 |
| uncharacterized protein | ALO42_03558 | Not Available | Negative | 3840327 - 3841550 | 43769.2 |
| uba/thif-type nad/fad binding fold protein | ALO42_03559 | Not Available | Negative | 3841594 - 3842523 | 34236.9 |
| alpha/beta hydrolase fold protein | ALO42_100604 | Not Available | Negative | 3842539 - 3843684 | 41822.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









