Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 3 | ALO42_00736 | Not Available | Positive | 3798557 - 3801253 | 97861.4 |
| tetr family transcriptional regulator | ALO42_00737 | Not Available | Negative | 3801344 - 3801997 | 23878.9 |
| sensory box sensor histidine kinase/response regulator | ALO42_101336 | Not Available | Positive | 3802505 - 3805414 | 107566.0 |
| tetr family transcriptional regulator | ALO42_00738 | Not Available | Positive | 3805520 - 3806128 | 22680.0 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_100540 | Not Available | Positive | 3806381 - 3808111 | 62756.3 |
| aldo/keto reductase family oxidoreductase | ALO42_00739 | Not Available | Positive | 3808221 - 3809042 | 30350.5 |
| putative zink transporter | ALO42_00740 | Not Available | Positive | 3809214 - 3810233 | 38438.2 |
| putative phosphate transporter | ALO42_00741 | Not Available | Positive | 3810359 - 3811975 | 56947.2 |
| multidrug efflux system, membrane fusion protein | ALO42_04460 | Not Available | Negative | 3812508 - 3813671 | 41694.8 |
| major facilitator superfamily transporter | ALO42_00743 | Not Available | Negative | 3813662 - 3815341 | 60060.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









