Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | ALO42_03729 | Not Available | Negative | 3780235 - 3780780 | 20222.5 |
| acyl carrier protein | ALO42_03730 | Not Available | Negative | 3780777 - 3781037 | 9942.9 |
| acyl carrier protein | ALO42_03731 | Not Available | Negative | 3781041 - 3781301 | 9283.0 |
| lysophospholipid acyltransferase | ALO42_03732 | Not Available | Negative | 3781276 - 3782088 | 30029.7 |
| uncharacterized protein | ALO42_03733 | Not Available | Negative | 3782064 - 3782783 | 26769.8 |
| para family protein | ALO42_03734 | Not Available | Positive | 3783091 - 3783870 | 29044.8 |
| paar motif protein | ALO42_03735 | Not Available | Negative | 3784101 - 3784496 | 14157.7 |
| malonate decarboxylase, alpha subunit | ALO42_03736 | Not Available | Positive | 3784753 - 3786435 | 61682.3 |
| putative 2--3'-dephosphocoenzyme-a synthase | ALO42_03737 | Not Available | Positive | 3786435 - 3787310 | 30552.7 |
| malonate decarboxylase acyl carrier protein | ALO42_03738 | Not Available | Positive | 3787312 - 3787611 | 10653.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









