Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl- synthase | ALO42_03719 | Not Available | Negative | 3769693 - 3770889 | 41999.9 |
| putative lipoprotein | ALO42_03720 | Not Available | Negative | 3770886 - 3771368 | 18369.5 |
| uncharacterized protein | ALO42_03721 | Not Available | Negative | 3771365 - 3772099 | 28024.5 |
| fad-binding protein | ALO42_03722 | Not Available | Negative | 3772096 - 3773343 | 45900.2 |
| putative exporter protein | ALO42_03723 | Not Available | Negative | 3773398 - 3775761 | 84701.2 |
| outer membrane lipoprotein-carrier protein, lola superfamily | ALO42_03724 | Not Available | Negative | 3775745 - 3776359 | 22832.6 |
| 4-hydroxybenzoyl-coa thioesterase | ALO42_03725 | Not Available | Negative | 3776356 - 3776805 | 17011.5 |
| uncharacterized protein | ALO42_03726 | Not Available | Negative | 3776871 - 3777818 | 36124.8 |
| glycosyl transferase family protein | ALO42_03727 | Not Available | Negative | 3777815 - 3778549 | 27886.2 |
| amp-dependent synthetase/ligase | ALO42_03728 | Not Available | Negative | 3778542 - 3780233 | 61843.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









