Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp pyrophosphatase | ALO42_03681 | Not Available | Negative | 3718183 - 3718515 | 11937.1 |
| phosphoribosyl-amp cyclohydrolase | ALO42_03682 | Not Available | Negative | 3718518 - 3718910 | 14894.8 |
| ubiquinone biosynthesis monooxygenase ubib | ALO42_100066 | Not Available | Negative | 3718978 - 3720597 | 62172.4 |
| sterol-binding domain-containing protein | ALO42_03683 | Not Available | Negative | 3720594 - 3721217 | 22833.1 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | ALO42_03684 | Not Available | Negative | 3721217 - 3721987 | 28408.3 |
| putative polyhydroxyalkanoic acid system protein | ALO42_03685 | Not Available | Positive | 3722132 - 3722410 | 10100.3 |
| polyhydroxyalkanoate granule-associated protein phaf | ALO42_05267 | Not Available | Positive | 3722664 - 3723416 | 26318.4 |
| uncharacterized protein | ALO42_03687 | Not Available | Negative | 3723820 - 3724191 | 13908.6 |
| atp-dependent protease atpase subunit hslu | ALO42_03688 | Not Available | Negative | 3724292 - 3725629 | 49899.2 |
| atp-dependent protease subunit hslv | ALO42_03689 | Not Available | Negative | 3725696 - 3726226 | 18769.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









