Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_05261 | Not Available | Negative | 3692595 - 3693296 | 25411.2 |
| histidine utilization repressor hutc | ALO42_03665 | Not Available | Negative | 3693188 - 3694009 | 30421.5 |
| n-formimino-l-glutamate deiminase | ALO42_03666 | Not Available | Positive | 3694094 - 3695467 | 50402.6 |
| outer membrane lipoprotein blc | ALO42_03667 | Not Available | Negative | 3695648 - 3696226 | 21869.1 |
| putative lipoprotein | ALO42_03668 | Not Available | Negative | 3696230 - 3696484 | 8826.7 |
| hypothetical protein | ALO42_101738 | Not Available | Positive | 3696521 - 3696694 | 6435.72 |
| fructose-1,6-bisphosphatase s 1 | ALO42_100311 | Not Available | Negative | 3696736 - 3697746 | 37064.2 |
| uncharacterized protein | ALO42_03669 | Not Available | Negative | 3697882 - 3699246 | 48966.3 |
| uncharacterized protein | ALO42_03670 | Not Available | Negative | 3699258 - 3702071 | 100949.0 |
| phosphorylase | ALO42_05264 | Not Available | Negative | 3702509 - 3704959 | 92030.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









