Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | ALO42_01037 | Not Available | Positive | 3654908 - 3656881 | 73563.1 |
| rna polymerase sigma factor rpod | ALO42_01038 | Not Available | Positive | 3656949 - 3658799 | 69461.9 |
| uncharacterized protein | ALO42_02891 | Not Available | Positive | 3659100 - 3659705 | 21899.5 |
| transposase | ALO42_02892 | Not Available | Positive | 3659804 - 3660301 | 18122.7 |
| hypothetical protein | ALO42_100670 | Not Available | Negative | 3660539 - 3660745 | 7750.52 |
| putative syringomycin rnd secretion system, outer membrane protein | ALO42_02893 | Not Available | Negative | 3660755 - 3662173 | 51242.3 |
| regulatory protein, luxr | ALO42_02894 | Not Available | Negative | 3662170 - 3663000 | 30741.8 |
| amino acid adenylation | ALO42_05012 | Not Available | Negative | 3663242 - 3678972 | 573937.0 |
| nitrilotriacetate monooxygenase family fmn-dependent oxidoreductase | ALO42_05257 | Not Available | Negative | 3679168 - 3680529 | 51165.3 |
| acyl-coa dehydrogenase, c-terminal | ALO42_03653 | Not Available | Negative | 3680526 - 3681731 | 43351.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









