Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_00163 | Not Available | Negative | 3619815 - 3620435 | 22613.5 |
| bbnr/asp-box repeat-containing glycosyl hydrolase | ALO42_00164 | Not Available | Negative | 3620432 - 3621730 | 47303.8 |
| cytochrome family protein | ALO42_00165 | Not Available | Negative | 3621769 - 3622314 | 20743.6 |
| pepsy superfamily protein | ALO42_00166 | Not Available | Negative | 3622314 - 3622577 | 9843.82 |
| two-component dna-binding response regulator qseb | ALO42_00167 | Not Available | Positive | 3622745 - 3623407 | 24641.1 |
| glycine/d-amino acid oxidase | ALO42_00168 | Not Available | Negative | 3624790 - 3626076 | 45595.1 |
| nad+-dependent alpha-aminoadipic semialdehyde dehydrogenase | ALO42_04303 | Not Available | Negative | 3626119 - 3627615 | 53563.0 |
| 4-aminobutyrate aminotransferase | ALO42_00170 | Not Available | Positive | 3627865 - 3629112 | 44353.6 |
| uncharacterized protein | ALO42_00171 | Not Available | Positive | 3629136 - 3630527 | 51096.5 |
| two-component dna-binding response regulator | ALO42_01017 | Not Available | Negative | 3630823 - 3631452 | 22813.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









