Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_04186 | Not Available | Positive | 3580406 - 3580987 | 21962.4 |
| uncharacterized protein | ALO42_04187 | Not Available | Positive | 3581635 - 3582879 | 46522.0 |
| isps1a | ALO42_04188 | Not Available | Positive | 3583153 - 3583521 | 14101.8 |
| isps1a-2 | ALO42_04189 | Not Available | Positive | 3583569 - 3584006 | 17207.3 |
| insecticidal toxin complex protein tcda1 | ALO42_05417 | Not Available | Negative | 3584393 - 3591940 | 279054.0 |
| diguanylate cye domain protein | ALO42_04191 | Not Available | Positive | 3592705 - 3593790 | 39473.0 |
| gnat family acetyltransferase | ALO42_04192 | Not Available | Negative | 3593806 - 3594237 | 16285.5 |
| hypothetical protein | ALO42_102546 | Not Available | Positive | 3594452 - 3594637 | 6483.26 |
| catalase-peroxidase | ALO42_04193 | Not Available | Positive | 3594627 - 3596897 | 82542.6 |
| pac motif:bacterial chemotaxis sensory transducer | ALO42_05419 | Not Available | Negative | 3596980 - 3598329 | 50794.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









