Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 3547180 - 3547571 | Not Available |
| integrase | ALO42_101745 | Not Available | Positive | 3547535 - 3548575 | 38202.4 |
| uncharacterized protein | ALO42_04180 | Not Available | Positive | 3550610 - 3553972 | 123810.0 |
| putative phage-related protein | ALO42_102270 | Not Available | Positive | 3553965 - 3554807 | 32967.9 |
| uncharacterized protein | ALO42_04181 | Not Available | Negative | 3555719 - 3557074 | 50159.0 |
| cell division ftsk/spoiiie protein | ALO42_05477 | Not Available | Negative | 3557094 - 3562544 | 199230.0 |
| uncharacterized protein | ALO42_04182 | Not Available | Negative | 3562493 - 3564046 | 58848.6 |
| uncharacterized protein | ALO42_05478 | Not Available | Negative | 3564043 - 3566142 | 76372.3 |
| uncharacterized protein | ALO42_04184 | Not Available | Positive | 3573497 - 3575254 | 65634.5 |
| myosin heavy chain | ALO42_04185 | Not Available | Positive | 3577485 - 3579593 | 79534.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









