Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/sulfonate/bicarbonate abc-type transport system, atp-biding protein | ALO42_00139 | Not Available | Positive | 3512295 - 3513596 | 47942.2 |
| sensor histidine kinase | ALO42_00140 | Not Available | Positive | 3513639 - 3514715 | 38557.4 |
| two-component dna-binding response regulator | ALO42_00141 | Not Available | Positive | 3514715 - 3515353 | 23344.4 |
| putative acyltransferase | ALO42_00142 | Not Available | Negative | 3515453 - 3517336 | 69191.2 |
| uncharacterized protein | ALO42_00143 | Not Available | Negative | 3517432 - 3518715 | 46485.2 |
| glucans biosynthesis protein d | ALO42_04289 | Not Available | Negative | 3519092 - 3520816 | 64489.4 |
| hypothetical protein | ALO42_101758 | Not Available | Negative | 3520910 - 3521110 | 7265.02 |
| band 7 protein | ALO42_00145 | Not Available | Positive | 3521252 - 3523186 | 69113.4 |
| protein hflc | ALO42_00146 | Not Available | Positive | 3523198 - 3524235 | 37550.2 |
| spfh domain protein | ALO42_100108 | Not Available | Positive | 3524232 - 3525302 | 38061.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









