Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fumarate hydratase, s i | ALO42_03801 | Not Available | Positive | 3497281 - 3498804 | 54912.5 |
| putative insecticidal toxin protein | ALO42_03802 | Not Available | Negative | 3498890 - 3500506 | 60431.7 |
| uncharacterized protein | ALO42_04287 | Not Available | Negative | 3500542 - 3501588 | 37730.9 |
| uncharacterized protein | ALO42_00132 | Not Available | Negative | 3501282 - 3502763 | 55752.3 |
| putative outer membrane protein | ALO42_00133 | Not Available | Positive | 3503069 - 3503587 | 18588.1 |
| uncharacterized protein | ALO42_00134 | Not Available | Negative | 3503709 - 3503906 | 7273.94 |
| non-heme catalase katn | ALO42_04288 | Not Available | Negative | 3503943 - 3504824 | 31606.2 |
| uncharacterized protein | ALO42_00136 | Not Available | Positive | 3505252 - 3505476 | 8454.99 |
| methyl-accepting chemotaxis protein | ALO42_00137 | Not Available | Positive | 3505902 - 3507932 | 72810.2 |
| binding-protein dependent transport system inner membrane protein | ALO42_00138 | Not Available | Positive | 3510515 - 3512269 | 64483.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









