Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoadipyl coa thiolase | ALO42_05292 | Not Available | Negative | 3476392 - 3477594 | 41925.6 |
| 3-oxoadipate:succinyl-coa transferase, subunit b | ALO42_03785 | Not Available | Negative | 3477591 - 3478370 | 27106.4 |
| 3-oxoadipate:succinyl-coa transferase subunit a | ALO42_03786 | Not Available | Negative | 3478370 - 3479257 | 32166.6 |
| hypothetical protein | ALO42_101393 | Not Available | Positive | 3479226 - 3479348 | 4849.56 |
| beta-ketoadipate pathway transcriptional regulator pcar | ALO42_03787 | Not Available | Negative | 3479384 - 3480226 | 30881.3 |
| hypothetical protein | ALO42_101487 | Not Available | Negative | 3480700 - 3480837 | 5099.91 |
| uncharacterized protein | ALO42_03788 | Not Available | Positive | 3481085 - 3481282 | 7798.17 |
| phosphate/sulfate permease | ALO42_03789 | Not Available | Positive | 3481489 - 3482961 | 52645.8 |
| uncharacterized protein | ALO42_03790 | Not Available | Negative | 3483011 - 3483211 | 6968.77 |
| formyltetrahydrofolate deformylase | ALO42_03791 | Not Available | Negative | 3483289 - 3484140 | 32471.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









