Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_100216 | Not Available | Positive | 3464719 - 3464889 | 5939.27 |
| emrb/qaca family drug resistance transporter | ALO42_05288 | Not Available | Positive | 3464906 - 3466513 | 56540.9 |
| hypothetical protein | ALO42_101305 | Not Available | Negative | 3466528 - 3467679 | 43185.7 |
| hypothetical protein | ALO42_100797 | Not Available | Negative | 3467642 - 3467845 | 7077.33 |
| multidrug resistance operon repressor mexr | ALO42_05289 | Not Available | Negative | 3468141 - 3468806 | 24984.9 |
| hypothetical protein | ALO42_102123 | Not Available | Positive | 3468840 - 3468962 | 4540.55 |
| secretion protein hlyd | ALO42_05290 | Not Available | Positive | 3469020 - 3470216 | 42475.8 |
| hydrophobe/amphiphile efflux-1 hae1 | ALO42_03781 | Not Available | Positive | 3470220 - 3473354 | 112386.0 |
| rnd efflux system, outer membrane lipoprotein, nodt | ALO42_03782 | Not Available | Positive | 3473351 - 3474811 | 53125.4 |
| dicarboxylic acid transporter | ALO42_03783 | Not Available | Negative | 3474878 - 3476179 | 47314.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









