Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | ALO42_02763 | Not Available | Positive | 3422931 - 3423500 | 21492.9 |
| acyl-coa thioesterase ii | ALO42_02764 | Not Available | Positive | 3423640 - 3424509 | 32747.6 |
| had family hydrolase | ALO42_02765 | Not Available | Positive | 3424506 - 3425096 | 21610.8 |
| uncharacterized protein | ALO42_02766 | Not Available | Negative | 3425379 - 3426368 | 36965.4 |
| zinc metalloprotease superfamily protein | ALO42_02767 | Not Available | Negative | 3426373 - 3427263 | 31739.3 |
| uncharacterized protein | ALO42_04981 | Not Available | Negative | 3427434 - 3428792 | 47959.9 |
| bro domain-containing protein | ALO42_02769 | Not Available | Negative | 3428859 - 3429290 | 16863.7 |
| uncharacterized protein | ALO42_02770 | Not Available | Positive | 3429966 - 3430301 | 11197.7 |
| uncharacterized protein | ALO42_02771 | Not Available | Positive | 3430320 - 3430655 | 12320.7 |
| uncharacterized protein | ALO42_02772 | Not Available | Positive | 3430922 - 3431407 | 18403.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









