Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease-endonuclease-phosphatase domain protein | ALO42_02753 | Not Available | Negative | 3413108 - 3414250 | 42852.4 |
| uncharacterized protein | ALO42_02754 | Not Available | Negative | 3414284 - 3414946 | 24553.9 |
| uncharacterized protein | ALO42_04979 | Not Available | Positive | 3415078 - 3415848 | 26916.7 |
| hypothetical protein | ALO42_102328 | Not Available | Negative | 3415998 - 3416150 | 5568.86 |
| dna polymerase iii, epsilon subunit | ALO42_02757 | Not Available | Positive | 3416740 - 3417354 | 22414.2 |
| asnc family transcriptional regulator | ALO42_02758 | Not Available | Negative | 3417359 - 3417826 | 17114.9 |
| drug/metabolite transporter superfamily permease | ALO42_02759 | Not Available | Positive | 3417994 - 3418908 | 31919.9 |
| atp-dependent rna helicase rhle | ALO42_02760 | Not Available | Positive | 3418947 - 3420299 | 49527.4 |
| uncharacterized protein | ALO42_04980 | Not Available | Negative | 3420548 - 3421984 | 50778.5 |
| histone deacetylase superfamily protein | ALO42_02762 | Not Available | Negative | 3421893 - 3422810 | 34101.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









