Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mixed non-ribosomal peptide synthetase/polyketide synthetase | ALO42_02746 | Not Available | Positive | 3396964 - 3403746 | 248088.0 |
| malonyl coa-acyl carrier protein transacylase | ALO42_02747 | Not Available | Positive | 3403751 - 3406918 | 115936.0 |
| uncharacterized protein | ALO42_02748 | Not Available | Positive | 3406968 - 3407903 | 34412.5 |
| uncharacterized protein | ALO42_02749 | Not Available | Positive | 3408042 - 3408641 | 21469.9 |
| uncharacterized protein | ALO42_02750 | Not Available | Positive | 3408742 - 3410298 | 57726.9 |
| hypothetical protein | ALO42_102301 | Not Available | Negative | 3410315 - 3410452 | 5323.61 |
| hypothetical protein | ALO42_102300 | Not Available | Negative | 3410560 - 3410676 | 4052.87 |
| hypothetical protein | ALO42_101876 | Not Available | Negative | 3410948 - 3411118 | 6461.78 |
| uncharacterized protein | ALO42_04978 | Not Available | Positive | 3411371 - 3411814 | 16327.6 |
| uncharacterized protein | ALO42_02751 | Not Available | Positive | 3412375 - 3412572 | 7045.59 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









