Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_02739 | Not Available | Negative | 3368974 - 3371289 | 87848.3 |
| atp-dependent helicase hrpb | ALO42_02740 | Not Available | Positive | 3371361 - 3373520 | 79211.3 |
| uncharacterized protein | ALO42_04973 | Not Available | Negative | 3373854 - 3374165 | 11139.4 |
| regulatory protein, lysr:lysr, substrate-binding protein | ALO42_100723 | Not Available | Negative | 3374441 - 3375439 | 37595.5 |
| putative transposase for insertion element | ALO42_102874 | Not Available | Negative | 3375680 - 3375787 | 3704.73 |
| taurine catabolism dioxygenase | ALO42_02741 | Not Available | Positive | 3376454 - 3377467 | 38816.8 |
| uncharacterized protein | ALO42_02742 | Not Available | Positive | 3377542 - 3377787 | 9445.49 |
| asparagine synthetase | ALO42_02743 | Not Available | Positive | 3378024 - 3380000 | 74799.5 |
| beta-ketoacyl synthase | ALO42_04974 | Not Available | Positive | 3380021 - 3389716 | 353796.0 |
| mixed non-ribosomal peptide synthetase/polyketide synthetase | ALO42_02745 | Not Available | Positive | 3389727 - 3396908 | 260335.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









