Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein phnk | ALO42_04495 | Not Available | Negative | 258576 - 259451 | 32413.2 |
| phosphonate metabolism phnj | ALO42_00856 | Not Available | Negative | 259394 - 260278 | 33219.5 |
| phosphonate metabolism protein phni | ALO42_00857 | Not Available | Negative | 260275 - 261354 | 39627.4 |
| phosphonate metabolism protein phnh | ALO42_00858 | Not Available | Negative | 261354 - 261950 | 21473.8 |
| phosphonate metabolism protein phng | ALO42_00859 | Not Available | Negative | 261950 - 262414 | 17116.3 |
| phosphonate metabolism transcriptional regulator phnf | ALO42_00860 | Not Available | Negative | 262429 - 263148 | 27133.5 |
| phosphonate transport protein phne | ALO42_00861 | Not Available | Negative | 263185 - 263973 | 28683.6 |
| phosphonate abc-type transport system, periplasmic substrate-binding protein phnd | ALO42_00862 | Not Available | Negative | 264002 - 265012 | 36977.9 |
| phosphonates import atp-binding protein phnc | ALO42_00863 | Not Available | Negative | 265057 - 265890 | 30254.7 |
| methyl-accepting chemotaxis protein | ALO42_04496 | Not Available | Negative | 266129 - 268081 | 70377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









