Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ALO42_02775 | Not Available | Negative | 2818954 - 2819556 | 21986.7 |
| Tail protein | ALO42_02776 | Not Available | Negative | 2819556 - 2820140 | 21532.5 |
| Tail tape measure protein | ALO42_02777 | Not Available | Negative | 2820162 - 2823566 | 119300.0 |
| Attl | Not Available | Not Available | Positive | 2821078 - 2821090 | Not Available |
| uncharacterized protein | ALO42_02778 | Not Available | Negative | 2823588 - 2823797 | 7547.1 |
| uncharacterized protein | ALO42_02779 | Not Available | Negative | 2823830 - 2824165 | 11676.0 |
| Hypothetical protein | ALO42_02780 | Not Available | Negative | 2824177 - 2824674 | 17429.4 |
| prophage psssm-03, hk97/gp10 family protein | ALO42_100726 | Not Available | Negative | 2825108 - 2825608 | 18472.2 |
| prophage psssm-03, orf23 | ALO42_02781 | Not Available | Negative | 2825612 - 2825776 | 5671.68 |
| Hypothetical protein | ALO42_02782 | Not Available | Negative | 2825786 - 2826106 | 11811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









