Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_200063 | Not Available | Negative | 3346111 - 3346404 | 10700.6 |
| hypothetical protein | ALO42_200078 | Not Available | Negative | 3346748 - 3347056 | 11017.0 |
| hypothetical protein | ALO42_200080 | Not Available | Negative | 3347075 - 3347269 | 6759.99 |
| hypothetical protein | ALO42_200090 | Not Available | Negative | 3347339 - 3347575 | 8449.18 |
| hypothetical protein | ALO42_200011 | Not Available | Negative | 3347609 - 3347743 | 5128.35 |
| hypothetical protein | ALO42_200022 | Not Available | Negative | 3347945 - 3348958 | 37887.5 |
| hypothetical protein | ALO42_200026 | Not Available | Negative | 3349073 - 3349801 | 27382.8 |
| hypothetical protein | ALO42_200054 | Not Available | Negative | 3350006 - 3350311 | 10884.1 |
| unknown protein sequence | ALO42_02729 | Not Available | Negative | 3350653 - 3350868 | 7563.15 |
| uncharacterized protein | ALO42_05456 | Not Available | Positive | 3351906 - 3352832 | 34207.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









