Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglyceromutase | ALO42_05141 | Not Available | Negative | 3313241 - 3314857 | 58707.2 |
| rhodanese -like proteiny domain protein | ALO42_03316 | Not Available | Positive | 3314930 - 3315343 | 14771.0 |
| glutaredoxin | ALO42_03317 | Not Available | Positive | 3315346 - 3315597 | 9145.12 |
| protein-export protein secb | ALO42_03318 | Not Available | Positive | 3315639 - 3316127 | 18012.3 |
| trna -methyltransferase | ALO42_05142 | Not Available | Negative | 3316189 - 3316941 | 27211.3 |
| anaerobically-induced outer membrane porin opre | ALO42_03321 | Not Available | Positive | 3318104 - 3319462 | 49001.5 |
| thiol-specific antioxidant protein lsfa | ALO42_03322 | Not Available | Positive | 3319632 - 3320270 | 23976.4 |
| organosulfonate abc-type transport system, periplasmic substrate-binding protein | ALO42_03323 | Not Available | Positive | 3320625 - 3321590 | 34621.8 |
| organosulfonate abc-type transporter system, permease protein | ALO42_03324 | Not Available | Positive | 3321619 - 3322416 | 28479.5 |
| aliphatic sulfonates import atp-binding protein ssub | ALO42_03325 | Not Available | Positive | 3322413 - 3323225 | 29478.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









