Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator pobr | ALO42_01784 | Not Available | Negative | 3301168 - 3302037 | 32752.2 |
| 4-hydroxybenzoate 3-monooxygenase | ALO42_01785 | Not Available | Positive | 3302191 - 3303375 | 44093.7 |
| putative 4-hydroxyphenylacetate permease | ALO42_01786 | Not Available | Positive | 3303591 - 3304916 | 48048.9 |
| uncharacterized protein | ALO42_04771 | Not Available | Positive | 3305176 - 3305464 | 10651.0 |
| imidazole glycerol phosphate synthase subunit hisf | ALO42_03310 | Not Available | Positive | 3305465 - 3306119 | 22785.2 |
| uncharacterized protein | ALO42_03311 | Not Available | Positive | 3306305 - 3307060 | 28029.1 |
| trypsin-like serine protease | ALO42_03312 | Not Available | Negative | 3307065 - 3308573 | 54878.1 |
| putative polysaccharide deacetylase | ALO42_03313 | Not Available | Negative | 3309605 - 3310387 | 28468.5 |
| putative carboxyl-terminal protease | ALO42_03314 | Not Available | Negative | 3310391 - 3311728 | 46864.2 |
| peptidase, m23/m37 family | ALO42_100506 | Not Available | Negative | 3311762 - 3313195 | 53144.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









