Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis chaperone flgn family protein | ALO42_01776 | Not Available | Positive | 3289621 - 3290088 | 17013.6 |
| putative c-di-gmp-binding protein with ycgr domain | ALO42_01777 | Not Available | Positive | 3290171 - 3290917 | 28547.1 |
| major facilitator family transporter | ALO42_01778 | Not Available | Negative | 3290985 - 3292415 | 51365.8 |
| glutamate--ammonia ligase | ALO42_01779 | Not Available | Negative | 3292467 - 3293810 | 48839.6 |
| methyltransferase type 11 | ALO42_100451 | Not Available | Negative | 3293904 - 3294857 | 35599.6 |
| glycosyltransferase, subfamily gt2 | ALO42_01780 | Not Available | Positive | 3295051 - 3295860 | 30359.9 |
| signal transduction histidine kinase | ALO42_01781 | Not Available | Negative | 3295924 - 3296619 | 25133.0 |
| chey family response regulator with tetratricopeptide repeat domain | ALO42_01782 | Not Available | Negative | 3296616 - 3298217 | 58342.2 |
| sh3 domain protein | ALO42_04770 | Not Available | Negative | 3298617 - 3299447 | 29845.1 |
| decarboxylase | ALO42_04769 | Not Available | Positive | 3299437 - 3301116 | 62161.4 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









