Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar two component sensor histidine kinase fles | ALO42_01746 | Not Available | Negative | 3255468 - 3256682 | 43954.9 |
| flagellar biosynthesis regulatory protein fleq | ALO42_04759 | Not Available | Negative | 3256805 - 3258280 | 55525.9 |
| uncharacterized protein | ALO42_01748 | Not Available | Negative | 3258460 - 3258756 | 10814.9 |
| flagellar biosynthesis protein flis | ALO42_01749 | Not Available | Negative | 3258781 - 3259170 | 14139.2 |
| flagellar hook-associated protein flid | ALO42_01750 | Not Available | Negative | 3259294 - 3260745 | 48939.4 |
| flagellar protein flag | ALO42_01751 | Not Available | Negative | 3260829 - 3261227 | 14147.8 |
| flagellar filament structural protein flic | ALO42_01752 | Not Available | Negative | 3261294 - 3262142 | 29319.3 |
| 3-oxoacyl-acp synthase | ALO42_01753 | Not Available | Negative | 3262470 - 3263396 | 32984.3 |
| glycosyl transferase, group 2 family protein | ALO42_04762 | Not Available | Negative | 3263704 - 3266613 | 106232.0 |
| glycosyl transferase family protein | ALO42_04764 | Not Available | Negative | 3266725 - 3270465 | 139409.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









