Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/dipeptide/oligopeptide-like abc-type transport system, permease protein | ALO42_00845 | Not Available | Positive | 247275 - 248192 | 33129.5 |
| peptide abc transporter permease | ALO42_00846 | Not Available | Positive | 248201 - 249109 | 32366.6 |
| oligopeptide/dipeptide abc transporter atp-binding protein-like protein | ALO42_00847 | Not Available | Positive | 249126 - 250127 | 36460.6 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | ALO42_00848 | Not Available | Positive | 250124 - 251146 | 37142.6 |
| putative m20 peptidase family dipeptidase | ALO42_00849 | Not Available | Positive | 251143 - 252570 | 51374.8 |
| amidase family protein | ALO42_00850 | Not Available | Positive | 253837 - 255360 | 54098.0 |
| carbon-phosphorus lyase complex accessory protein phnp | ALO42_00851 | Not Available | Negative | 255370 - 256122 | 27521.1 |
| ribose 1,5-bisphosphate phosphokinase phnn | ALO42_00852 | Not Available | Negative | 256113 - 256679 | 20821.1 |
| phosphonate metabolism protein phnm | ALO42_00853 | Not Available | Negative | 256679 - 257824 | 41423.5 |
| phosphonate metabolism protein phnl | ALO42_00854 | Not Available | Negative | 257818 - 258543 | 26764.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









