Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpt domain protein | ALO42_01737 | Not Available | Negative | 3245545 - 3245901 | 13426.9 |
| response regulator receiver domain protein | ALO42_01738 | Not Available | Negative | 3245936 - 3247642 | 62080.0 |
| stas domain protein | ALO42_100235 | Not Available | Negative | 3247602 - 3248030 | 15869.0 |
| flagellar export protein flij | ALO42_01739 | Not Available | Negative | 3248034 - 3248483 | 17515.7 |
| flagellar protein export atpase flii | ALO42_01740 | Not Available | Negative | 3248490 - 3249848 | 48579.0 |
| flagellar assembly protein flih | ALO42_01741 | Not Available | Negative | 3249838 - 3250656 | 30175.5 |
| flagellar motor switch protein flig | ALO42_01742 | Not Available | Negative | 3250672 - 3251688 | 37024.7 |
| flagellar m-ring protein | ALO42_01743 | Not Available | Negative | 3251681 - 3253465 | 63256.0 |
| flagellar hook-basal body complex protein flie | ALO42_01744 | Not Available | Negative | 3253481 - 3253810 | 11695.1 |
| helix-turn-helix, fis-type | ALO42_04758 | Not Available | Negative | 3254053 - 3255471 | 51028.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









