Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flhb | ALO42_01728 | Not Available | Negative | 3238075 - 3239211 | 41864.8 |
| flagellar biosynthesis protein flir | ALO42_01729 | Not Available | Negative | 3239212 - 3239997 | 28147.0 |
| flagellar biosynthetic protein fliq | ALO42_01730 | Not Available | Negative | 3240004 - 3240273 | 9922.83 |
| flagellar transport protein flip | ALO42_01731 | Not Available | Negative | 3240299 - 3241051 | 27144.6 |
| flagellar biosynthesis protein flio | ALO42_01732 | Not Available | Negative | 3241051 - 3241491 | 15992.1 |
| flagellar motor switch protein flin | ALO42_01733 | Not Available | Negative | 3241492 - 3241950 | 15999.9 |
| flagellar motor switch protein flim | ALO42_01734 | Not Available | Negative | 3242012 - 3242980 | 35996.6 |
| flagellar basal body-associated protein flil | ALO42_01735 | Not Available | Negative | 3242990 - 3243502 | 18351.8 |
| hypothetical protein | ALO42_102503 | Not Available | Positive | 3243695 - 3244036 | 12211.9 |
| unknown protein sequence | ALO42_05449 | Not Available | Positive | 3243928 - 3245481 | 56952.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









