Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid-like protein | ALO42_01443 | Not Available | Negative | 3218413 - 3218967 | 19714.9 |
| pspa/im30 protein | ALO42_01444 | Not Available | Negative | 3218998 - 3219705 | 25208.8 |
| uncharacterized protein | ALO42_04654 | Not Available | Negative | 3219732 - 3220448 | 26646.1 |
| syringopeptin synthetase c | ALO42_01633 | Not Available | Positive | 3220533 - 3220887 | 12832.4 |
| hypothetical protein | ALO42_101730 | Not Available | Negative | 3220888 - 3222290 | 50691.7 |
| hypothetical protein | ALO42_102872 | Not Available | Positive | 3222291 - 3223329 | 38232.8 |
| uncharacterized protein | ALO42_01715 | Not Available | Negative | 3223378 - 3223779 | 14807.0 |
| chemotaxis protein chew | ALO42_01716 | Not Available | Negative | 3223780 - 3224259 | 17683.0 |
| chew-like protein | ALO42_01717 | Not Available | Negative | 3224317 - 3225219 | 32519.4 |
| cobyrinic acid a,c-diamide synthase | ALO42_01718 | Not Available | Negative | 3225295 - 3226083 | 28458.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









