Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_01435 | Not Available | Positive | 3206785 - 3207369 | 20833.4 |
| uncharacterized protein | ALO42_01436 | Not Available | Positive | 3207375 - 3208301 | 34983.7 |
| hypothetical protein | ALO42_102006 | Not Available | Positive | 3209452 - 3209616 | 5955.1 |
| putative rnd-type efflux transporter | ALO42_01437 | Not Available | Negative | 3209713 - 3212103 | 87606.8 |
| bnr/asp-box repeat protein | ALO42_100927 | Not Available | Negative | 3212131 - 3213246 | 39413.5 |
| uncharacterized protein | ALO42_01438 | Not Available | Negative | 3213411 - 3214766 | 51415.0 |
| glutathionylspermidine synthase | ALO42_04653 | Not Available | Negative | 3215283 - 3216626 | 50793.9 |
| lipoprotein | ALO42_01440 | Not Available | Negative | 3216452 - 3217195 | 25747.7 |
| putative membrane protein | ALO42_01441 | Not Available | Negative | 3217223 - 3217648 | 14724.4 |
| uncharacterized protein | ALO42_01442 | Not Available | Negative | 3217662 - 3218390 | 27002.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









