Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_00009 | Not Available | Negative | 3191854 - 3192951 | 40401.5 |
| glutaminase | ALO42_00010 | Not Available | Negative | 3193012 - 3193950 | 33684.9 |
| exonuclease sbcc | ALO42_100342 | Not Available | Positive | 3195297 - 3198861 | 133706.0 |
| uncharacterized protein | ALO42_04647 | Not Available | Negative | 3198703 - 3199236 | 19634.5 |
| putative 3-carboxymuconate cye | ALO42_01431 | Not Available | Negative | 3199671 - 3200843 | 42693.5 |
| hypothetical protein | ALO42_100271 | Not Available | Negative | 3200924 - 3201322 | 14802.3 |
| uncharacterized protein | ALO42_01432 | Not Available | Negative | 3201344 - 3202336 | 36386.9 |
| major facilitator transporter | ALO42_04649 | Not Available | Negative | 3202372 - 3203685 | 47887.9 |
| dihydroxy-acid dehydratase | ALO42_01434 | Not Available | Positive | 3203900 - 3205642 | 62265.0 |
| transcriptional regulator of the arabinose operon in shewanella, gntr family | ALO42_100495 | Not Available | Positive | 3205606 - 3206451 | 31127.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









