Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_04246 | Not Available | Negative | 3179094 - 3179328 | 9033.85 |
| unknown protein sequence | ALO42_00001 | Not Available | Negative | 3179470 - 3179661 | 7249.94 |
| uncharacterized protein | ALO42_00002 | Not Available | Positive | 3179746 - 3181197 | 53452.8 |
| short chain dehydrogenase | ALO42_00003 | Not Available | Positive | 3182507 - 3183247 | 26542.4 |
| uncharacterized protein | ALO42_00004 | Not Available | Positive | 3184220 - 3185644 | 51581.6 |
| glycosyl hydrolase, family 15 | ALO42_04247 | Not Available | Negative | 3185700 - 3187544 | 69670.1 |
| glucose 1-dehydrogenase | ALO42_00006 | Not Available | Negative | 3187519 - 3188322 | 28404.2 |
| aryl-alcohol dehydrogenase-related oxidoreductase | ALO42_100179 | Not Available | Negative | 3188386 - 3189495 | 41182.9 |
| abc transporter atp-binding/permease | ALO42_00007 | Not Available | Negative | 3189521 - 3191332 | 66922.1 |
| uncharacterized protein | ALO42_04250 | Not Available | Positive | 3191136 - 3191846 | 26381.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









